Accounting & Finance

Tax Implications of Remote Work: What SMBs Need to Know

  • 13 min Read
  • August 26, 2025

Author

Escalon

Table of Contents

The rise of remote work has opened exciting possibilities for small and medium businesses – access to a wider talent pool, lower overhead costs, and greater flexibility. However, it has also introduced new tax complexities that many SMBs are not fully prepared for. When your employees can work from anywhere (or when your business serves customers across state lines online), you may face a tangle of multi-state tax obligations. Navigating these tax implications is now an important part of compliance and financial planning for businesses. This post will break down the key tax challenges remote work presents – particularly in the United States – and offer insight into how SMBs can address them. 

Multi-State Payroll and Income Tax Withholding 

One of the most immediate implications of remote work is dealing with state income tax withholding for employees who live and work in a state different from where the business is located. In the past, if all your staff worked at your office in one state, you only worried about that state’s payroll taxes. Now, even a single remote employee in another state can create tax obligations in that state. 

After the shift to widespread telecommuting, states have largely maintained their income tax rules: employees are subject to income tax withholding for the state where they work. This means if you have an employee working from home in State B while your company is in State A, you likely need to register in State B and withhold State B’s income taxes from that employee’s paycheck. Failing to do so could result in compliance issues and penalties down the line. State agencies advise employers to withhold income tax for out-of-state workers to avoid complications – otherwise, if the employee doesn’t pay the tax themselves, the employer could be on the hook for back taxes and finesofm.wa.gov. 

A challenge here is that each state has its own rules and thresholds. Some states have reciprocity agreements (for example, between neighboring states) that simplify withholding if an employee lives in one and works in another. Other states don’t, meaning the employee might have to file two state tax returns (one for each state) and the employer might need to remit taxes to multiple states. As a business owner, you must determine in which states you now have a payroll tax obligation because of remote employees. 

What SMBs Should Do: 

  • Identify where all your remote employees are located (including those who might have moved during the pandemic) and research the tax withholding requirements of those states. 
  • Register with the tax authorities in those states as needed, and set up payroll withholding for those jurisdictions. Many states require registration once you have even one employee working there. 
  • Be aware of reciprocity agreements: if you and your employee’s home state have one, the employee can often submit a form so you only withhold for their home state (avoiding double taxation). 
  • Keep good records of days worked in each state if employees split time among locations – some states have thresholds (e.g., if an employee works in the state for X days, taxes kick in). 

Staying compliant can be burdensome. Utilizing a professional employer organization or a payroll provider that handles multi-state tax calculations can ease this process. In many cases, outsourcing HR tasks like multi-state payroll to experts (such as Escalon’s HR services) helps ensure accuracy and timeliness, sparing you the headache of tracking numerous state regulations. 

“Convenience of Employer” Rules and Double Taxation 

Remote work has also brought up a tricky situation: a handful of states (notably New York, and a few others) have what are known as “convenience of the employer” rules. Under such rules, if an employee’s home office is out-of-state and they are working remotely for their own convenience (and not because the employer requires it), the state where the employer is located may still tax that income. This has led to instances of double taxation: for example, a New York-based company’s employee working from their home in New Jersey might be subject to New York tax on their salary and New Jersey tax, unless credits or other arrangements mitigate it. 

To illustrate, New York’s policy is that out-of-state remote work days are taxed by NY unless the arrangement is out of necessity. As a legal note explains, New York requires employers to withhold tax from nonresident employees who work from another state for their own convenience (not employer’s necessity)swlaw.edu. This can catch remote workers and employers by surprise. While some states (like New Jersey in this case) offer a tax credit to avoid true double taxation, not all doswlaw.edu. It’s a confusing patchwork, and it underscores the importance of understanding the specific rules of any high-tax state where you have operations or employees. 

For SMBs: if you have employees who shifted to remote work across state lines, check if your (or their) state has a convenience rule. This is especially critical if you are headquartered in a state known for aggressive tax policies (NY, for example). In some cases, employers have tried to establish an official company office or co-working space in the employee’s home state to satisfy the “employer’s necessity” condition, but that may not be practical for everyone. 

The broader point is that remote work can create unexpected state tax obligations on wages that neither the business nor the employee anticipated. Always consult a tax advisor if you suspect such rules might apply, because the cost of non-compliance or double-taxation can be significant. 

Business Tax Nexus and Remote Work 

Beyond employee withholding, remote work can affect a business’s nexus for other taxes. “Nexus” is the connection that makes a business subject to a state’s taxes. Traditionally, having a physical presence (an office, store, or warehouse) in a state established nexus for various taxes like income tax and sales/use tax. Now, having a remote employee in a state could establish a taxable presence there for the company’s state corporate income taxes or franchise taxes. In the eyes of many states, an employee’s home office = a company location for tax purposes. 

This means an SMB might unintentionally become subject to state business taxes or at least filing requirements in a state solely because an employee works from there. The rules vary: some states have issued guidance offering leniency (especially during COVID-related temporary telework), but many now treat a permanent remote worker as creating nexus. The Government Accountability Office noted that remote sellers and employers now grapple with a patchwork of requirements across jurisdictions after states expanded their definitions of nexusgao.govgao.gov. 

For example: Suppose you run a software company based in Texas (no state income tax) but hire a full-time developer who works from home in California. California might consider your company to have nexus there due to the employee’s presence, potentially obligating you to file a California income tax return (and pay taxes on a portion of your income). Each state has its own rules on this, so it’s important to research and understand where you may have unknowingly established nexus. 

Sales Tax Nexus: Similarly, if your remote team leads you to store inventory in various states (maybe through distributed fulfillment centers or employees storing samples/products), that can create sales tax nexus. And of course, completely aside from remote workers, selling to customers online nationwide has its own sales tax implications (more on that in the next section). 

What to Do: 

  • Evaluate your nexus footprint: In which states do you now have employees? Property? Significant sales? Consult with a tax professional to determine if those states consider those activities sufficient for nexus. 
  • Register and file if needed: If yes, you may need to register for that state’s business taxes (income/franchise tax, etc.) and possibly pay apportionment of income. This can be complex – sometimes a company might owe minimal tax but still must file returns. 
  • Consider organizational strategy: If remote work significantly complicates your tax situation, some businesses consider setting up separate entities or reconsidering where to hire. However, this is a major decision and should factor in non-tax considerations too. Often, the benefit of the right talent outweighs the added tax work. 
  • Track and document: Maintain good documentation of your remote work arrangements. Should a state question nexus, being able to show details (like when an employee started working there, or if their role is purely remote with no in-state client work, etc.) could be useful in discussions or audits. 

Sales Tax Challenges in the Digital Age 

Separate from employee-related taxes, the “digital age” has revolutionized sales – particularly e-commerce – and with it, sales tax obligations for SMBs. Historically, an online retailer without physical presence in a state didn’t have to collect sales tax in that state. But the landmark 2018 U.S. Supreme Court decision on economic nexus changed that gao.gov. Now, states can require out-of-state businesses to collect sales tax if they exceed certain sales thresholds (economic nexus), even without physical presence. 

The result? An explosion of sales tax complexity. Today, 45 states (plus D.C.) have sales taxes, and most have enacted economic nexus rules with their own thresholds (commonly $100,000 in sales or 200 transactions annually, but it varies by state). As GAO observed, this has created a “complex patchwork of requirements with wide variation” among statesgao.gov. Some differences include: 

  • Different Thresholds: One state might exempt you if you have under $100K in sales there, another might set the bar at $500K, and some count transactions (number of sales) as well as revenue. 
  • Product Taxability: States don’t even agree on what items are taxable. For instance, one state may tax digital downloads or software-as-a-service, while another doesn’t. Food, clothing, and other categories also vary. If you sell a range of products online, you need to know the rules in each customer’s state. 
  • Local Tax Jurisdictions: Some states have local sales taxes (city/county) that you must collect, further complicating the rate calculations. 
  • Marketplace Facilitator Laws: If you sell through large online marketplaces, understand that they are likely to handle tax on those sales (in most states). But if you also sell via your own website, you’re responsible for those sales. 

The compliance burden on SMBs can be significant. Businesses have reported incurring costs for software, compliance services, and audits to manage multi-state sales tax collectiongao.gov. Indeed, staying current with the myriad legal requirements in dozens of jurisdictions is not something most small businesses can handle manuallygao.gov. There are entire software solutions like Escalon aimed at automating this and using them has become almost essential once you cross nexus thresholds in multiple states. 

Solutions and Best Practices: 

  • Automate Sales Tax Calculation: Use an ecommerce platform or add-on that calculates the correct sales tax for each transaction based on the customer’s location and the product type. This saves enormous time and helps ensure accuracy. 
  • Monitor Your Nexus: Keep an eye on your sales by state. The moment you approach a nexus threshold in a new state, prepare to register there. Some software can alert you, but you should also do periodic reviews (monthly or quarterly). 
  • Register and Remit Promptly: When required, register with the state’s taxing authority and begin collecting sales tax. Holding off can lead to owing tax out-of-pocket (since if you didn’t collect it, some states can still demand it from you later). Once registered, be diligent about filing returns (even $0 returns if you have no sales in a period). 
  • Utilize Streamlined Programs: Twenty-four states are part of the Streamlined Sales and Use Tax Agreement (SSUTA), which strives to simplify sales tax compliance (single registration for all member states, uniform definitions, etc.)gao.gov. If you have nexus in many states, consider using SST’s centralized registration and resources – it can marginally reduce the headache. 
  • Leverage Marketplace Collection: If you sell through marketplaces, understand that they likely handle tax on those sales (in most states). But maintain records of what the marketplace collected vs. your own direct sales, as you’ll need this info for filing or in case of inquiries. 
  • Consult Experts: Sales tax is one area where outsourcing can save a lot of pain. Consider consulting with a tax professional or using compliance services. Given how much time and risk is involved, many SMBs find it worthwhile to have experts manage multi-state sales tax filing. For example, Escalon’s finance and accounting services include compliance assistance – ensuring you stay on top of these obligations without derailing your focus from running the business. 

Other Considerations: International Remote Work and Taxation 

While this post focuses on U.S. domestic issues, a quick note if you have remote team members in other countries or if you, as an owner, decide to work remotely abroad: international work can trigger tax residency questions, visa requirements, and Permanent Establishment rules for corporate taxes overseas. Always seek local legal and tax advice in such cases to avoid unintended consequences. Additionally, consider how remote work policies (like allowing work from anywhere) might intersect with payroll taxes and social contributions in different countries. 

Remote work and digital business are here to stay, offering incredible flexibility and reach for SMBs. Yet, as we’ve detailed, they come with a web of tax obligations that can be daunting. From multi-state payroll withholding to sales tax across hundreds of jurisdictions, the “borderless” business still faces borders in the form of tax codes. The key takeaway is not to ignore these issues: proactive compliance is far better (and cheaper) than reactive fixes after a state tax notice or audit. 

Staying compliant in this landscape requires vigilance, the right tools, and often, expert help. As a business owner, your time is best spent on strategic activities – not poring over state tax regulations. That’s where partnering with experienced professionals can make a big difference. Escalon offers comprehensive back-office solutions, including help with HR, payroll, and tax compliance. Our team stays up-to-date on evolving laws and will ensure your multi-state obligations are handled accurately. We take pride in making our clients’ back-office one less thing to worry about, so you can focus on growth. 

Don’t let tax complexities hold back your remote-work strategy or e-commerce expansion. Reach out to Escalon today to learn how our finance and accounting services can keep you compliant across state lines (and even international lines). We’ll help you implement the right solutions – from setting up multi-state payroll to managing sales tax filings – all as part of making your back office run smoothly. Embrace the future of work and sales with confidence, knowing Escalon’s experts have your compliance covered. Contact us now to ensure that as your business boundaries expand, your tax compliance stays solid. 

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